分子生物学
IVD分子诊断
细胞培养与分析
蛋白研究
细胞因子
重组蛋白
抗体
高通量测序建库
病原检测UCF系列
生物医药
工具酶
抑制剂激活剂与常用试剂
仪器
耗材

Gene signature of m6A-related targets to predict prognosis and immunotherapy response in ovarian cancer

Tan Wei, Liu Shiyi, Deng Zhimin, Dai Fangfang, Yuan Mengqin, Hu Wei, Li Bingshu, Cheng Yanxiang

Journal:JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY

IF:4.32

DOI:10.1007/s00432-022-04162-3

PMID:36048273

Published:2022-09-01

research field:分子生物学

Abstract

Purpose The aim of the study was to construct a risk score model based on m6A-related targets to predict overall survival and immunotherapy response in ovarian cancer. Methods The gene expression profiles of 24 m6A regulators were extracted. Survival analysis screened 9 prognostic m6A regulators. Next, consensus clustering analysis was applied to identify clusters of ovarian cancer patients. Furthermore, 47 phenotype-related differentially expressed genes, strongly correlated with 9 prognostic m6A regulators, were screened and subjected to univariate and the least absolute shrinkage and selection operator (LASSO) Cox regression. Ultimately, a nomogram was constructed which presented a strong ability to predict overall survival in ovarian cancer. Results CBLL1 , FTO , HNRNPC , METTL3 , METTL14 , WTAP , ZC3H13 , RBM15B and YTHDC2 were associated with worse overall survival (OS) in ovarian cancer. Three m6A clusters were identified, which were highly consistent with the three immune phenotypes. What is more, a risk model based on seven m6A-related targets was constructed with distinct prognosis. In addition, the low-risk group is the best candidate population for immunotherapy. Conclusion We comprehensively analyzed the m6A modification landscape of ovarian cancer and detected seven m6A-related targets as an independent prognostic biomarker for predicting survival. Furthermore, we divided patients into high- and low-risk groups with distinct prognosis and select the optimum population which may benefit from immunotherapy and constructed a nomogram to precisely predict ovarian cancer patients’ survival time and visualize the prediction results.

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