Spatial Transcriptomics Delineates the Inflammatory Landscape of Human Dental Pulp: Regional Crosstalk and Therapeutic Implications
Fengyuan Zhang, Yuanyuan Kong, Xiaobin Fu, Jiyuan Zuo, Qining Guo, Jiayi Wang, Manlin Xu, Qian Zeng, Yuejiao Zhang, Junqi Ling, Qianzhou Jiang, Xi Wei, Jianmao Zheng
Journal:INTERNATIONAL ENDODONTIC JOURNAL
IF:6.4
DOI:10.1111/iej.70200
PMID:
Published:2026-06-15
research field:细胞间通讯牙髓病学信号通路空间转录组学免疫微环境口腔医学
Abstract
AIM This study aimed to investigate the spatial cellular architecture and molecular interactions in healthy and inflamed dental pulp using spatial transcriptomics (Visium HD), to elucidate the pathological mechanisms of pulpitis and identify potential therapeutic targets for vital pulp therapy. METHODOLOGY Spatial transcriptomic sequencing was performed on dental pulp tissues from two healthy individuals and two pulpitis patients, with integrated analyses including Seurat clustering, cell trajectory inference, GO enrichment, CellphoneDB interaction network modelling and PROGENy pathway activity assessment to compare cellular heterogeneity and signalling regulation. RESULTS Nine major cell types (fibroblasts, progenitor cells, endothelial cells, neural cells, plasma cells, B cells, T cells, monocytes and macrophages) were identified, and their spatial distribution was mapped. Subclustering and differential expression analysis revealed that fibroblast (e.g., APOL2+/CCN2+) and progenitor cell (e.g., CDK5R1+/CCRL2+) subclusters exacerbated fibrosis and immune activation, while TMPRSS4+/CST5+ fibroblasts were critical for homeostasis. Pro-inflammatory endothelial subclusters (IGHG1+/CXCL13+) expanded, while anti-inflammatory subclusters (SERPINA5+/SERPINA3+) diminished, may lead to vascular-immune imbalance. Upregulation of immunoglobulin genes and downregulation of MBP disrupted neural function, while inflamed pulp showed increased B cells and macrophages, decreased T cells and monocytes. Inflammatory pathways (PI3K, EGFR, TGFβ, MAPK, Oestrogen, NF-κB) were upregulated, with enhanced TGFβ signalling in endothelial cells. Intercellular interaction analysis showed altered APP-CD74 signalling in endothelial-macrophage interactions and disrupted CXCL14-mediated communication between immune and endothelial cells. CONCLUSIONS
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