分子生物学
IVD分子诊断
细胞培养与分析
蛋白研究
细胞因子
重组蛋白
抗体
高通量测序建库
病原检测UCF系列
生物医药
工具酶
抑制剂激活剂与常用试剂
仪器
耗材

Transcriptomic Profiling Reveals Key Genes of Halophyte Apocyni Veneti Folium (Apocynum venetum L.) and Regulatory Mechanism of Salt Tolerance

Chen Cuihua, Wang Chengcheng, Chen Feiyan, Cai Zhichen, Yuan Jiahuan, Hua Yujiao, Shi Jingjing, Liu Zixiu, Zou Lisi, Liu Xunhong, Yin Lian

Journal:JOURNAL OF PLANT GROWTH REGULATION

IF:4.8

DOI:10.1007/s00344-023-10908-1

PMID:

Published:2023-01-20

research field:分子生物学进化生物学遗传学与基因组学

Abstract

Apocyni Veneti Folium (AVF) is a salt-tolerant medicinal halophyte and soil salinity is a main stress affecting its quality. Molecular bases involved in quality evaluation and ecological adaptations to abiotic constraints can be explored using omics tools. In the study, AVF was treated with four levels of salt stress (control, 100, 200 and 300 mM NaCl, respectively) and subjected to de novo-based RNA-sequencing. We constructed GO and KEGG analysis on the obtained DEGs. After molecular phylogenetic analysis, we isolated and characterized one representative and up-regulated candidate gene AvUGT ( Tr_AVENL_25169 ) encoding UDP-glucosyltransferase under salt stress. Results showed that the obtained clean reads were assembled into a total of 54,276 high-quality unigenes. Notably, specific genes related to flavonoid glucoside biosynthesis and salt-tolerant regulation, such as genes encoding transcription factors, transporters, glucosyltransferase, heat shock protein and plant hormone signal transduction-related protein, preferentially up-regulated by low level of salt. Combined with previous metabonomic analysis, the results revealed key genes that contribute to elucidate the reduced salt toxicity in AVF. Furthermore, the transcript profiles of UGT genes were consistent with the accumulation of flavonoid glycosides in AVF; the candidate gene AvUGT probably plays a critical role in biosynthesis of flavonoid glucosides in response to salt environment. These results provided a basis for future research on the regulatory mechanism of salt stress of medicinal halophyte AVF.

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