HnRNPK 凝聚物有助于增强子与启动子之间的环路形成,并促进 RNA 聚合酶 II 的招募。
hnRNPK condensates facilitate enhancer–promoter looping and RNA polymerase II recruitment
Ye Rong, Zhao Hailian, Chen Juan, Wu Qigui, Wang Di, Cai Zhaokui, Wang Ruoyan, Li Jingxin, Cheng Tiantian, Zhang Ming, Liu Wanglong, Yang Ruiyun, Zhou Jie, Yuan Zhen, Liu Bowen, Cao Changchang, Zhu S
Journal:NATURE GENETICS
IF:25.5
DOI:10.1038/s41588-026-02710-y
PMID:42587094
Published:2026-08-12
research field:神经科学卒中研究信号转导炎症生物学分子医学
Abstract
Enhancer RNAs interact with promoter-derived RNAs to dictate enhancer–promoter looping, but the RNA-binding protein that mediates this process has remained unidentified. Here we identify hnRNPK as a general structural regulator that preferentially binds to nascent RNAs transcribed from enhancer and promoter regions, promoting enhancer–promoter looping and transcriptional activation. We further show that hnRNPK forms phase-separated, cavity-containing condensates that encapsulate RNA polymerase II (Pol II) via its RPB3 subunit, facilitating chromatin looping and potentially enabling recruitment of Pol II from enhancers to promoters through protein dimerization. Notably, a mutation associated with Au–Kline syndrome in hnRNPK (c.953+1dupG) alters its condensates from a liquid-like to a gel-like state, leading to developmental defects in knock-in mice. Fibroblasts derived from these mutants display reduced enhancer–promoter looping and decreased Pol II recruitment at promoters of key developmental genes. These findings suggest that hnRNPK is a structural regulator of enhancer–promoter communication and highlight the importance of RNA–RNA interactions mediated by RNA-binding proteins in transcriptional regulation.
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