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海南新沙塘鳢与葛氏鲈塘鳢线粒体基因组比较及系统发育研究

Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny

Wenqi Lv, Haifeng Jiang, Jing Bo, Cheng Wang, Liandong Yang, Shunping He

Journal:GENOMICS

IF:6.21

DOI:10.1016/j.ygeno.2020.06.039

PMID:32619573

Published:2020-07-01

research field:结构生物学微生物学环境生物学

Abstract

To investigate the molecular evolution of mitochondrial genomes among the family Odontobutidae, the complete mitochondrial genomes of Neodontobutis hainanensis and Perccottus glenii were sequenced and compared with seven odontobutids species. The genome organization, base composition, codon usage, and gene arrangement of N. hainanensis exhibited high similarity to P. glenii compared to those of other Odontobutidae species. Reconstructed phylogenetic analyses of Odontobutidae strongly supported that Neodontobutis and Perccottus formed a unifying group sister to Odontobutis . Our molecular dating time revealed that the two species diverged approximately 21.7 Ma during Miocene, later than that of Odontobutis . Selection analyses showed stronger selective constraints in mitochondrial genes for P. glenii . However, two positively selected sites in NADH4 and NADH6 genes were respectively detected in N. hainanensis and P. glenii , indicating that they might evolve different metabolic performance in response to the contrasting environments.

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