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心脏非肌细胞单细胞染色质可及性图谱揭示心脏再生过程中的组织修复程序

Single-cell chromatin accessibility landscape of cardiac non-myocytes identifies tissue repair program during heart regeneration

Chen Zihao, Nie Yage, Huang Liying, Zeng Ni, Gong Jixing, Gao Yichen, Wen Qiye, Chen Xiaoyong, Ji Xiaoqian, Li Yun, Lan Tian, Jiang Lan, Wang Jia, Xu Jin, Cao Nan

Journal:npj Regenerative Medicine

IF:7

DOI:10.1038/s41536-026-00465-y

PMID:41786730

Published:2026-03-05

research field:表观基因组学心脏病学单细胞基因组学再生医学发育生物学

Abstract

The restricted regenerative potential of adult hearts poses a significant barrier to effective repair following injury. In contrast to numerous vertebrates, mammalian hearts exhibit only transient neonatal renewal capacity during the initial days of life. Beyond cardiomyocytes, understanding the diverse compositions of non-cardiomyocytes (non-CMs) is imperative for maintaining heart microenvironment homeostasis during neonatal heart regeneration. Here, we conduct single-cell ATAC sequencing on neonatal hearts at varying time points post-apical resection to profile the epigenetic landscape. Intriguingly, fibroblasts and endothelial cells, as the most abundant populations in the heart, exhibit the most dynamic chromatin remodeling upon injury. Furthermore, we reveal CEBPD and AP-1 family transcriptional factors as pivotal trans-regulators orchestrating these alterations, governing beneficial fibroblast activation and endothelial cell angiogenesis crucial for cardiac regeneration, respectively. Collectively, our study delineates the cellular identity of non-CMs at the epigenome level using single-cell approaches, offering insights into cell type-targeted interventions for heart regeneration.

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